Skill Permissions

All skills & plugins / Scientific Agent Skills (K-Dense)

biopython

Provides Biopython workflows for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Supports batch processing, custom molecular-biology pipelines, BLAST automation, structure analysis, and motif analysis.

Type
Skill by K-Dense Inc.
Catalog
Scientific Agent Skills (K-Dense)
Source
K-Dense-AI/scientific-agent-skills/skills/biopython (9 files scanned)
Install and details
Agent Skills Index entry
License
Biopython License Agreement (SKILL.md frontmatter)
Signals
Pre-approved shell

Pre-approved tools

Shell (any command). Tools listed in allowed-tools (or an agent's tools) can be used without a permission prompt while the skill is active, depending on your agent and settings.

KindTools
read/searchRead
write/edit filesWriteEdit
shell, any commandBash

Declared in biopython/SKILL.md.

Hooks

No hooks.

MCP servers and apps

None.

Bundled code

No code files, only instructions and other assets.

Credentials referenced

No key, token or secret environment variable found in code or MCP config.

Static scan of commit 5f2bc03 on 2026-10-27. Signals are patterns found in the files, not a verdict: a network call can be the whole point of a skill. Read the linked lines before you decide. How the scan works.