Skill All skills & plugins / Scientific Agent Skills (K-Dense)
neuropixels-analysis
Analyzes Neuropixels extracellular recordings end-to-end with SpikeInterface. Covers loading SpikeGLX/Open Ephys/NWB data, preprocessing, drift/motion correction, Kilosort4 (and CPU) spike sorting, quality metrics, and unit curation (threshold-based, model-based UnitRefine, and AI-assisted visual review). Use when working with Neuropixels 1.0/2.0 recordings, spike sorting, or extracellular electro
- Type
- Skill by K-Dense Inc.
- Catalog
- Scientific Agent Skills (K-Dense)
- Source
- K-Dense-AI/scientific-agent-skills/skills/neuropixels-analysis (19 files scanned)
- Install and details
- Agent Skills Index entry
- License
- MIT license (SKILL.md frontmatter)
- Signals
- Bundled scripts
Pre-approved tools
No allowed-tools or tools list in its SKILL.md, command or agent files, so the agent asks before using tools as usual.
Hooks
No hooks.
MCP servers and apps
None.
Bundled code
8 code files (Python):
neuropixels-analysis/scripts/explore_recording.pyneuropixels-analysis/scripts/export_to_phy.pyneuropixels-analysis/scripts/preprocess_recording.pyneuropixels-analysis/scripts/run_sorting.pyneuropixels-analysis/scripts/neuropixels_pipeline.pyneuropixels-analysis/scripts/compute_metrics.pyneuropixels-analysis/scripts/_common.pyneuropixels-analysis/assets/analysis_template.py
Network calls
No HTTP or socket call pattern found in the code.
Starts other programs
No subprocess, exec or eval pattern found.
Credentials referenced
No key, token or secret environment variable found in code or MCP config.
Static scan of commit 5f2bc03 on 2026-10-27. Signals are patterns found in the files, not a verdict: a network call can be the whole point of a skill. Read the linked lines before you decide. How the scan works.